dssp.com.mx
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1. DSSP - PDB-REDO
Link: https://pdb-redo.eu/dssp/about
Description: WebDSSP provides an elaborate description of the secondary structure elements in a protein structure, including backbone hydrogen bonding and the topology of β-sheets. The most popular feature is the per-residue assignment of secondary structure with a single character code: H = α-helix. B = residue in isolated β-bridge.
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2. DSSP (algorithm) - Wikipedia
Link: https://en.wikipedia.org/wiki/DSSP_(algorithm)
Description: WebThe DSSP algorithm is the standard method for assigning secondary structure to the amino acids of a protein, given the atomic-resolution coordinates of the protein. The abbreviation is only mentioned once in the 1983 paper describing this algorithm, [2] where it is the name of the Pascal program that implements the algorithm Define Secondary ...
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3. GitHub - PDB-REDO/dssp: Application to assign secondary structure …
Link: https://github.com/PDB-REDO/dssp
Description: WebDSSP is a database of secondary structure assignments (and much more) for all protein entries in the Protein Data Bank (PDB). DSSP is also the program that calculates DSSP entries from PDB entries. DSSP does not predict secondary structure.
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4. DSSP - PDB-REDO
Link: https://pdb-redo.eu/dssp
Description: WebDSSP: Assign secondary structure to proteins. DSSP (Dictionary of Secondary Structure in Proteins) is an algorithm originally designed by Wolfgang Kabsch and Chris Sander to standardise secondary structure assigment based on atomic coordinates. DSSP does not predict secondary structure.
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5. Bio.PDB.DSSP module — Biopython 1.75 documentation
Link: https://biopython.org/docs/1.75/api/Bio.PDB.DSSP.html
Description: WebBio.PDB.DSSP module. Use the DSSP program to calculate secondary structure and accessibility. You need to have a working version of DSSP (and a license, free for academic use) in order to use this. For DSSP, see http://swift.cmbi.ru.nl/gv/dssp/.
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6. Protein secondary structure classification revisited: processing DSSP
Link: https://pubmed.ncbi.nlm.nih.gov/24866861/
Description: WebJul 28, 2014 · Abstract. A first step toward three-dimensional protein structure description is the characterization of secondary structure. The most widely used program for secondary structure assignment remains DSSP, introduced in 1983, with currently more than 400 citations per year.
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7. Protein secondary structure assignment revisited: a detailed …
Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1249586/
Description: WebSep 15, 2005 · A few years later, Kabsch and Sander developed a method called DSSP that still remains one of the most widely-used program for secondary structure assignment. The DSSP algorithm is based on the detection of hydrogen …
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8. Online DSSP - Secondary Structure Assignments of PDB
Link: https://www.biogem.org/cgi-bin/edssp.pl
Description: WebOfficial Site | Home Page. The online DSSP program calculates DSSP (Define Secondary Structure of Proteins) entries from PDB entries. DSSP is the standard method for assigning secondary structure to the amino acids of a protein, given the atomic coordinates of …
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9. DSSP on Biowulf - National Institutes of Health
Link: https://hpc.nih.gov/apps/DSSP.html
Description: WebDSSP on Biowulf. The DSSP program was designed by Wolfgang Kabsch and Chris Sander to standardize secondary structure assignment. DSSP is a database of secondary structure assignments (and much more) for all protein entries in the Protein Data Bank (PDB). DSSP is also the program that calculates DSSP entries from PDB entries.
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10. Delaware State Police | Dover DE - Facebook
Link: https://www.facebook.com/DSPNewsroom/
Description: WebDelaware State Police, Dover, Delaware. 134,175 likes · 5,487 talking about this · 718 were here. Citizen Satisfaction Survey...