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Top URL related to msigdb
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1. GSEA | MSigDB
gsea-msigdb.org
Link: https://www.gsea-msigdb.org/gsea/msigdb
Description: WEBThe Molecular Signatures Database (MSigDB) is a resource of tens of thousands of annotated gene sets for use with GSEA software, divided into Human and Mouse collections. From this web site, you can. Examine a gene set and its annotations. See, for example, the HALLMARK_APOPTOSIS human gene set page. Browse gene sets by …
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2. GSEA-MSigDB
gsea-msigdb.org
Link: http://gsea-msigdb.org/
Description: WEB7-Sep-2022: Announcing the first release of Mouse MSigDB (v2022.1.Mm) with ~16,000 gene sets that can be used directly for GSEA analysis of mouse datasets without the need for orthology conversion. A new release of Human MSigDB (v2022.1.Hs) includes updates to Reactome, GO, HPO, and WikiPathways.
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3. GSEA | MSigDB | Human MSigDB Collections
gsea-msigdb.org
Link: https://www.gsea-msigdb.org/gsea/msigdb/collections.jsp
Description: WEBThe 34550 gene sets in the Human Molecular Signatures Database (MSigDB) are divided into 9 major collections, and several subcollections. See the table below for a brief description of each, and the Human MSigDB Collections: Details and Acknowledgments page for more detailed descriptions.
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4. GSEA | MSigDB | Browse Human Gene Sets
gsea-msigdb.org
Link: https://www.gsea-msigdb.org/gsea/msigdb/genesets.jsp
Description: WEBBrowse Human Gene Sets. Gene sets starting with A. Click on a gene set name to view its gene set page.
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5. GSEA | MSigDB | Browse Mouse Gene Sets
gsea-msigdb.org
Link: https://www.gsea-msigdb.org/gsea/msigdb/mouse/genesets.jsp
Description: WEBBrowse Mouse Gene Sets. Gene sets starting with A. Click on a gene set name to view its gene set page.
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6. GSEA-MSigDB Documentation
gsea-msigdb.org
Link: https://docs.gsea-msigdb.org/
Description: WEBThe Molecular Signatures Database (MSigDB) is a resource of tens of thousands of annotated gene sets for use with GSEA software, divided into Human and Mouse collections. Please see the GSEA-MSigDB website for further information, tools, and details about the current releases.
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7. Human MSigDB Collections: Details and Acknowledgments
gsea-msigdb.org
Link: https://www.gsea-msigdb.org/gsea/msigdb/human/collection_details.jsp
Description: WEBHuman MSigDB Collections: Details and Acknowledgments General notes. Beginning in MSigDB 7.0, we are now using Ensembl as the platform annotation authority. Identifiers for genes are mapped to their HGNC approved Gene Symbol and NCBI Gene ID through annotations extracted from Ensembl's BioMart data service, and will be updated at each …
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8. GSEA User Guide - GSEA-MSigDB Documentation
gsea-msigdb.org
Link: https://docs.gsea-msigdb.org/GSEA/GSEA_User_Guide/
Description: WEBDocumentation. The GSEA documentation includes this User Guide, a Tutorial that walks you through key features of GSEA, and a FAQ that answers frequently asked questions. MSigDB, the Molecular Signature Database. This database provides curated gene sets for use with the gene set enrichment analysis.
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9. MSigDB 7.3 - GSEA-MSigDB Documentation
gsea-msigdb.org
Link: https://docs.gsea-msigdb.org/MSigDB/Release_Notes/MSigDB_7.3/
Description: WEBMSigDB v7.3 (Mar 2021) This release includes a reorganization of C7 to accommodate the addition of vaccination response gene sets provided by the Human Immunology Project Consortium among other minor updates and additions. Note: Due to substantial changes introduced in MSigDB 7.0, using GSEA 4.0.0+ is recommended when utilizing MSigDB …
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10. Molecular signatures database (MSigDB) 3.0 - PMC - National …
nih.gov
Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3106198/
Description: WEBJun 6, 2011 · The Molecular Signatures Database (MSigDB) is one of the most widely used repositories of such sets.